STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THC_1309Sulfate adenylyltransferase. (458 aa)    
Predicted Functional Partners:
cysC
Adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate.
 
 0.998
THC_1311
Adenylylsulfate reductase subunit beta.
 
  
 0.988
THC_1312
Adenylylsulfate reductase subunit alpha.
 
 
 0.988
THC_0032
Phosphoesterase.
     
  0.900
THC_1460
HIT family hydrolase.
     
  0.900
THC_0671
uroporphyrin-III C-methyltransferase.
  
  
 0.814
THC_1314
Heterodisulfide reductase subunit A.
 
   
 0.810
THC_1310
Hypothetical protein.
       0.707
THC_1315
Hypothetical protein.
 
   
 0.659
THC_0171
Hypothetical protein.
  
     0.617
Your Current Organism:
Caldimicrobium thiodismutans
NCBI taxonomy Id: 1653476
Other names: C. thiodismutans, Caldimicrobium thiodismutans Kojima et al. 2016, DSM 29380, NBRC 110713, Thermodesulfobacteriaceae bacterium TF1, strain TF1
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.