STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THC_1498Hypothetical protein. (626 aa)    
Predicted Functional Partners:
THC_1497
Chemotaxis protein CheY.
 
   0.879
THC_1328
PAS/PAC sensor hybrid histidine kinase.
 
 
0.808
THC_0364
Histidine kinase.
  
 
 0.770
THC_0937
ArsR family transcriptional regulator.
 
 
 0.756
THC_0417
Chemotaxis protein CheY.
  
 
 0.745
THC_1382
Chemotaxis protein CheY.
 
 0.733
THC_0414
Chemotaxis protein CheY.
  
 
 0.721
THC_0573
Hypothetical protein.
 
 
 
0.709
THC_0904
Sensory box histidine kinase/response regulator.
 
 
0.654
THC_1108
Hypothetical protein.
 
 
0.623
Your Current Organism:
Caldimicrobium thiodismutans
NCBI taxonomy Id: 1653476
Other names: C. thiodismutans, Caldimicrobium thiodismutans Kojima et al. 2016, DSM 29380, NBRC 110713, Thermodesulfobacteriaceae bacterium TF1, strain TF1
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.