Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AMY18949.1 | cysD | A3Q40_01563 | A3Q40_01058 | AP-4-A phosphorylase. | Sulfate adenylyltransferase subunit 2. | 0.900 |
AMY18949.1 | cysNC | A3Q40_01563 | A3Q40_01057 | AP-4-A phosphorylase. | Bifunctional enzyme CysN/CysC; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. | 0.901 |
cysA | cysD | A3Q40_01055 | A3Q40_01058 | Sulfate/thiosulfate import ATP-binding protein CysA; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system. | Sulfate adenylyltransferase subunit 2. | 0.972 |
cysA | cysG | A3Q40_01055 | A3Q40_01404 | Sulfate/thiosulfate import ATP-binding protein CysA; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system. | Siroheme synthase. | 0.405 |
cysA | cysH | A3Q40_01055 | A3Q40_01059 | Sulfate/thiosulfate import ATP-binding protein CysA; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system. | Putative phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. | 0.660 |
cysA | cysNC | A3Q40_01055 | A3Q40_01057 | Sulfate/thiosulfate import ATP-binding protein CysA; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system. | Bifunctional enzyme CysN/CysC; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. | 0.999 |
cysA | cysT | A3Q40_01055 | A3Q40_01053 | Sulfate/thiosulfate import ATP-binding protein CysA; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system. | Sulfate transport system permease protein CysT; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. | 0.999 |
cysA | cysW | A3Q40_01055 | A3Q40_01054 | Sulfate/thiosulfate import ATP-binding protein CysA; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system. | Sulfate transport system permease protein CysW. | 0.999 |
cysA | sbpA | A3Q40_01055 | A3Q40_01052 | Sulfate/thiosulfate import ATP-binding protein CysA; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system. | Sulfate-binding protein. | 0.999 |
cysA | sir | A3Q40_01055 | A3Q40_01060 | Sulfate/thiosulfate import ATP-binding protein CysA; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system. | Sulfite reductase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.773 |
cysD | AMY18949.1 | A3Q40_01058 | A3Q40_01563 | Sulfate adenylyltransferase subunit 2. | AP-4-A phosphorylase. | 0.900 |
cysD | cysA | A3Q40_01058 | A3Q40_01055 | Sulfate adenylyltransferase subunit 2. | Sulfate/thiosulfate import ATP-binding protein CysA; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system. | 0.972 |
cysD | cysG | A3Q40_01058 | A3Q40_01404 | Sulfate adenylyltransferase subunit 2. | Siroheme synthase. | 0.897 |
cysD | cysH | A3Q40_01058 | A3Q40_01059 | Sulfate adenylyltransferase subunit 2. | Putative phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. | 0.992 |
cysD | cysNC | A3Q40_01058 | A3Q40_01057 | Sulfate adenylyltransferase subunit 2. | Bifunctional enzyme CysN/CysC; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. | 0.999 |
cysD | cysT | A3Q40_01058 | A3Q40_01053 | Sulfate adenylyltransferase subunit 2. | Sulfate transport system permease protein CysT; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. | 0.977 |
cysD | cysW | A3Q40_01058 | A3Q40_01054 | Sulfate adenylyltransferase subunit 2. | Sulfate transport system permease protein CysW. | 0.977 |
cysD | nrnA | A3Q40_01058 | A3Q40_01417 | Sulfate adenylyltransferase subunit 2. | Bifunctional oligoribonuclease and PAP phosphatase NrnA. | 0.901 |
cysD | sbpA | A3Q40_01058 | A3Q40_01052 | Sulfate adenylyltransferase subunit 2. | Sulfate-binding protein. | 0.980 |
cysD | sir | A3Q40_01058 | A3Q40_01060 | Sulfate adenylyltransferase subunit 2. | Sulfite reductase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.977 |
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