STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nasCAssimilatory nitrate reductase catalytic subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (712 aa)    
Predicted Functional Partners:
nasB
Assimilatory nitrate reductase electron transfer subunit.
 
 0.999
nasD
Nitrite reductase [NAD(P)H]; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
 
 0.995
narK
Nitrate/nitrite transporter NarK.
 
 
 0.993
nirD
Nitrite reductase (NADH) small subunit.
 
  
 0.988
AMY21064.1
Putative monooxygenase.
     
  0.900
nuoF
NADH-quinone oxidoreductase subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family.
  
 
 0.891
nuoE
NADH-quinone oxidoreductase subunit E.
  
 
 0.883
andAa
Anthranilate 1,2-dioxygenase system ferredoxin--NAD(+) reductase component.
 
  
 0.842
AMY19351.1
Hypothetical protein.
 
   
 0.823
AMY19350.1
Hypothetical protein.
 
     0.730
Your Current Organism:
Rhodococcus sp. PBTS1
NCBI taxonomy Id: 1653478
Other names: R. sp. PBTS 1, Rhodococcus sp. PBTS 1
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