STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMY19552.1Hypothetical protein. (312 aa)    
Predicted Functional Partners:
AMY19551.1
Insertion element uncharacterized 12.0 kDa protein.
 
  
 0.870
AMY19550.1
Hypothetical protein.
       0.705
AMY19553.1
Hypothetical protein.
       0.538
AMY19277.1
Insertion element uncharacterized 12.0 kDa protein.
 
  
 0.451
AMY19541.1
Insertion element uncharacterized 12.0 kDa protein.
 
  
 0.451
AMY20024.1
Insertion element uncharacterized 12.0 kDa protein.
 
  
 0.451
AMY20333.1
Insertion element uncharacterized 12.0 kDa protein.
 
  
 0.451
AMY20475.1
Insertion element uncharacterized 12.0 kDa protein.
 
  
 0.451
AMY20748.1
Insertion element uncharacterized 12.0 kDa protein.
 
  
 0.451
AMY19554.1
Hypothetical protein.
       0.441
Your Current Organism:
Rhodococcus sp. PBTS1
NCBI taxonomy Id: 1653478
Other names: R. sp. PBTS 1, Rhodococcus sp. PBTS 1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.