STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gene:80945244Transcriptional regulator. (69 aa)    
Predicted Functional Partners:
CRK59889.1
Putative regulator.
  
   
 0.652
CRK56383.1
ABC transporter ATP-binding protein.
  
    0.645
CRK58179.1
FIG01363442: possible membrane protein.
  
   
 0.622
gene:80946937
annotation not available
  
   
 0.610
gene:80949577
Probable secreted protein.
  
     0.566
CRK58451.1
Serine-protein kinase RsbW.
  
     0.537
CRK61077.1
FIG054221: Possible conserved alanine rich membrane protein.
  
     0.511
CRK61022.1
Peptidase.
  
     0.509
gene:80947773
ACT domain-containing protein.
  
     0.500
gene:80949129
tRNA_edit domain-containing protein.
      
 0.499
Your Current Organism:
Alloactinosynnema sp. L07
NCBI taxonomy Id: 1653480
Other names: A. sp. L-07, Alloactinosynnema sp. L-07
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.