STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRK59473.1Cysteine desulfurase. (423 aa)    
Predicted Functional Partners:
CRK56357.1
Putative iron-sulfur cluster assembly scaffold protein for SUF system, SufE2.
 
 
 0.837
gene:80945212
Iron-sulfur cluster assembly protein SufB.
 
 
 0.823
CRK56355.1
Iron-sulfur cluster assembly ATPase protein SufC.
 
  
 0.814
CRK56353.1
Iron-sulfur cluster assembly protein SufD.
 
 
 0.751
gene:80949815
Cysteine desulfurase.
  
     0.598
gene:80948349
Uncharacterized protein.
     
 0.555
CRK59471.1
Hypothetical protein.
       0.526
gene:80948351
Putative transcriptional regulator.
       0.511
gene:80945218
PaaD-like protein (DUF59) involved in Fe-S cluster assembly.
 
  
 0.493
egtD
Dimethylhistidine N-methyltransferase; Catalyzes the SAM-dependent triple methylation of the alpha- amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine; Belongs to the methyltransferase superfamily. EgtD family.
  
  
 0.444
Your Current Organism:
Alloactinosynnema sp. L07
NCBI taxonomy Id: 1653480
Other names: A. sp. L-07, Alloactinosynnema sp. L-07
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