gene:80948453 protein (Alloactinosynnema sp. L07)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

gene:80948453

Uncharacterized protein. (271 aa)

Predicted Functional Partners:

CRK59577.1

0.990

gene:80948455

0.978

CRK57199.1

0.862

CRK57781.1

0.861

CRK62153.1

0.828

gene:80946061

0.819

gene:80946647

0.801

CRK59605.1

0.783

gene:80946633

0.769

gene:80948487

0.765

Your Current Organism:

Alloactinosynnema sp. L07

NCBI taxonomy Id: 1653480
Other names: A. sp. L-07, Alloactinosynnema sp. L-07

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CRK57199.1	CRK59577.1	gene:80946060	gene:80948454	Putative thiolase.	Lipid transfer protein or keto acyl-CoA thiolase Ltp4.	0.775
CRK57199.1	gene:80946061	gene:80946060	gene:80946061	Putative thiolase.	MaoC-like domain-containing protein.	0.961
CRK57199.1	gene:80946633	gene:80946060	gene:80946633	Putative thiolase.	Putative CoA-transferase subunit beta Rv3552/MT3656.	0.810
CRK57199.1	gene:80946647	gene:80946060	gene:80946647	Putative thiolase.	MaoC-like domain-containing protein.	0.835
CRK57199.1	gene:80948453	gene:80946060	gene:80948453	Putative thiolase.	Uncharacterized protein.	0.862
CRK57781.1	CRK59577.1	gene:80946646	gene:80948454	Putative thiolase.	Lipid transfer protein or keto acyl-CoA thiolase Ltp4.	0.775
CRK57781.1	gene:80946061	gene:80946646	gene:80946061	Putative thiolase.	MaoC-like domain-containing protein.	0.837
CRK57781.1	gene:80946633	gene:80946646	gene:80946633	Putative thiolase.	Putative CoA-transferase subunit beta Rv3552/MT3656.	0.811
CRK57781.1	gene:80946647	gene:80946646	gene:80946647	Putative thiolase.	MaoC-like domain-containing protein.	0.961
CRK57781.1	gene:80948453	gene:80946646	gene:80948453	Putative thiolase.	Uncharacterized protein.	0.861
CRK59577.1	CRK57199.1	gene:80948454	gene:80946060	Lipid transfer protein or keto acyl-CoA thiolase Ltp4.	Putative thiolase.	0.775
CRK59577.1	CRK57781.1	gene:80948454	gene:80946646	Lipid transfer protein or keto acyl-CoA thiolase Ltp4.	Putative thiolase.	0.775
CRK59577.1	CRK59605.1	gene:80948454	gene:80948482	Lipid transfer protein or keto acyl-CoA thiolase Ltp4.	Hypothetical protein.	0.747
CRK59577.1	CRK62153.1	gene:80948454	gene:80951061	Lipid transfer protein or keto acyl-CoA thiolase Ltp4.	FIG00994761: hypothetical protein.	0.818
CRK59577.1	gene:80946061	gene:80948454	gene:80946061	Lipid transfer protein or keto acyl-CoA thiolase Ltp4.	MaoC-like domain-containing protein.	0.845
CRK59577.1	gene:80946633	gene:80948454	gene:80946633	Lipid transfer protein or keto acyl-CoA thiolase Ltp4.	Putative CoA-transferase subunit beta Rv3552/MT3656.	0.814
CRK59577.1	gene:80946647	gene:80948454	gene:80946647	Lipid transfer protein or keto acyl-CoA thiolase Ltp4.	MaoC-like domain-containing protein.	0.836
CRK59577.1	gene:80948453	gene:80948454	gene:80948453	Lipid transfer protein or keto acyl-CoA thiolase Ltp4.	Uncharacterized protein.	0.990
CRK59577.1	gene:80948455	gene:80948454	gene:80948455	Lipid transfer protein or keto acyl-CoA thiolase Ltp4.	Lipid carrier protein or keto acyl-CoA thiolase Ltp3.	0.857
CRK59577.1	gene:80948487	gene:80948454	gene:80948487	Lipid transfer protein or keto acyl-CoA thiolase Ltp4.	Transcriptional regulator, TetR family.	0.756