STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRK60724.1Tetratricopeptide repeat-containing protein / Transcriptional regulator, LuxR family. (543 aa)    
Predicted Functional Partners:
gene:80949892
Monooxygenase, putative.
  
     0.525
gene:80949839
Putative two-component system sensor kinase.
 
 
 0.523
gene:80949610
Uncharacterized protein.
       0.518
gene:80949613
Uncharacterized protein.
       0.497
CRK58205.1
Putative two-component system sensor kinase.
 
 
 0.484
gene:80949737
GAF:ATP-binding region, ATPase-like.
 
 
 0.445
gene:80949841
Uncharacterized protein.
  
     0.444
CRK56373.1
Two-component system sensor kinase.
 
 
 0.425
CRK58989.1
Putative two-component system sensor kinase.
 
 
 0.425
CRK60722.1
Cold shock protein.
       0.425
Your Current Organism:
Alloactinosynnema sp. L07
NCBI taxonomy Id: 1653480
Other names: A. sp. L-07, Alloactinosynnema sp. L-07
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.