STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001238275_05831Unannotated protein. (367 aa)    
Predicted Functional Partners:
GCA_001238275_01368
Unannotated protein.
    
 0.587
GCA_001238275_08834
Unannotated protein.
    
 0.587
GCA_001238275_06741
Unannotated protein.
    
  0.573
GCA_001238275_06742
Unannotated protein.
    
  0.573
GCA_001238275_04767
Unannotated protein.
  
     0.522
GCA_001238275_05301
Unannotated protein.
  
     0.516
GCA_001238275_05830
Unannotated protein.
       0.507
GCA_001238275_02322
Unannotated protein.
     
 0.495
GCA_001238275_05832
Unannotated protein.
       0.491
GCA_001238275_07120
Unannotated protein.
    
  0.487
Your Current Organism:
Bradyrhizobium viridifuturi
NCBI taxonomy Id: 1654716
Other names: B. viridifuturi, Bradyrhizobium sp. CMVU02, Bradyrhizobium sp. CMVU30, Bradyrhizobium sp. SEMIA 6387, Bradyrhizobium sp. SEMIA 6428, Bradyrhizobium sp. SEMIA 690, Bradyrhizobium viridifuturi Helene et al. 2015, C 100a, CNPSo 991, LMG 28866, LMG:28866, strain SEMIA 690
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.