STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001238275_05925Unannotated protein. (272 aa)    
Predicted Functional Partners:
GCA_001238275_05924
Unannotated protein.
 
     0.917
GCA_001238275_01409
Unannotated protein.
  
  
 0.794
GCA_001238275_07310
Unannotated protein.
  
  
 0.794
GCA_001238275_07861
Unannotated protein.
  
  
 0.794
GCA_001238275_08250
Unannotated protein.
  
  
 0.794
GCA_001238275_04487
Unannotated protein.
  
 
 0.747
GCA_001238275_04254
Unannotated protein.
 
 
 0.742
GCA_001238275_00287
Unannotated protein.
 
 
 0.724
GCA_001238275_00283
Unannotated protein.
 
     0.722
GCA_001238275_04253
Unannotated protein.
  
 
 0.707
Your Current Organism:
Bradyrhizobium viridifuturi
NCBI taxonomy Id: 1654716
Other names: B. viridifuturi, Bradyrhizobium sp. CMVU02, Bradyrhizobium sp. CMVU30, Bradyrhizobium sp. SEMIA 6387, Bradyrhizobium sp. SEMIA 6428, Bradyrhizobium sp. SEMIA 690, Bradyrhizobium viridifuturi Helene et al. 2015, C 100a, CNPSo 991, LMG 28866, LMG:28866, strain SEMIA 690
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.