STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OLO92049.1Anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology. (309 aa)    
Predicted Functional Partners:
OLO92205.1
RNA polymerase subunit sigma; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.
 
 
 0.998
OLO92048.1
Thiol:disulfide interchange protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.904
OLO91994.1
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.581
OLO89444.1
Biotin-requiring enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.580
OLO90888.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.508
OLO92132.1
Rhamnan synthesis protein F; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.491
OLO91167.1
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.488
BKH10_02805
Hypothetical protein; Frameshifted; internal stop; incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.454
OLO89818.1
sprT domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.439
OLO91978.1
RNA polymerase subunit sigma-70; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.
   
 
 0.438
Your Current Organism:
Actinomyces naeslundii
NCBI taxonomy Id: 1655
Other names: A. naeslundii, ATCC 12104, CCUG 18310, CCUG 2238, CCUG 32832, CCUG 35333, CDC W826, CIP 103128, DSM 43013, JCM 8349, NCTC 10301
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.