STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OLO92123.1Tat pathway signal sequence; Derived by automated computational analysis using gene prediction method: Protein Homology. (702 aa)    
Predicted Functional Partners:
OLO92122.1
Glycosyltransferase WbuB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.931
OLO92112.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.790
OLO92121.1
Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.778
OLO92113.1
Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.725
OLO92217.1
Asparagine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.563
OLO91202.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.556
OLO92366.1
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.552
OLO92124.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.526
OLO89385.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.463
OLO92119.1
Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.431
Your Current Organism:
Actinomyces naeslundii
NCBI taxonomy Id: 1655
Other names: A. naeslundii, ATCC 12104, CCUG 18310, CCUG 2238, CCUG 32832, CCUG 35333, CDC W826, CIP 103128, DSM 43013, JCM 8349, NCTC 10301
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.