STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OLO91263.1Triacylglycerol lipase; Derived by automated computational analysis using gene prediction method: Protein Homology. (438 aa)    
Predicted Functional Partners:
OLO89129.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.463
OLO91264.1
Triacylglycerol lipase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.461
OLO88281.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
 
 0.450
BKH10_04900
CAAX protease family protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.446
OLO91056.1
CopG family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.446
OLO91167.1
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.431
OLO91368.1
Antitoxin protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.431
BKH10_03795
IS481 family transposase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.431
OLO90929.1
DUF2339 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.431
OLO90800.1
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.431
Your Current Organism:
Actinomyces naeslundii
NCBI taxonomy Id: 1655
Other names: A. naeslundii, ATCC 12104, CCUG 18310, CCUG 2238, CCUG 32832, CCUG 35333, CDC W826, CIP 103128, DSM 43013, JCM 8349, NCTC 10301
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