Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| OLO90774.1 | OLO90775.1 | BKH10_05780 | BKH10_05785 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Proteasome protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.510 |
| OLO90774.1 | OLO90776.1 | BKH10_05780 | BKH10_05790 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ubiquitin-like protein Pup; Protein modifier that is covalently attached to lysine residues of substrate proteins, thereby targeting them for proteasomal degradation. The tagging system is termed pupylation. Belongs to the prokaryotic ubiquitin-like protein family. | 0.450 |
| OLO90774.1 | OLO90822.1 | BKH10_05780 | BKH10_05795 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.510 |
| OLO90775.1 | OLO90774.1 | BKH10_05785 | BKH10_05780 | Proteasome protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.510 |
| OLO90775.1 | OLO90776.1 | BKH10_05785 | BKH10_05790 | Proteasome protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ubiquitin-like protein Pup; Protein modifier that is covalently attached to lysine residues of substrate proteins, thereby targeting them for proteasomal degradation. The tagging system is termed pupylation. Belongs to the prokaryotic ubiquitin-like protein family. | 0.833 |
| OLO90775.1 | OLO90777.1 | BKH10_05785 | BKH10_05800 | Proteasome protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Proteasome ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.945 |
| OLO90775.1 | OLO90822.1 | BKH10_05785 | BKH10_05795 | Proteasome protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.855 |
| OLO90775.1 | OLO90906.1 | BKH10_05785 | BKH10_03995 | Proteasome protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Proteasome ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.864 |
| OLO90775.1 | OLO90908.1 | BKH10_05785 | BKH10_04005 | Proteasome protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ubiquitin-like protein Pup; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.522 |
| OLO90775.1 | OLO90969.1 | BKH10_05785 | BKH10_04375 | Proteasome protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.551 |
| OLO90775.1 | OLO91023.1 | BKH10_05785 | BKH10_04690 | Proteasome protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Integration host factor MihF; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.563 |
| OLO90775.1 | OLO91629.1 | BKH10_05785 | BKH10_01920 | Proteasome protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.597 |
| OLO90775.1 | whiB | BKH10_05785 | BKH10_01700 | Proteasome protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.551 |
| OLO90776.1 | OLO90774.1 | BKH10_05790 | BKH10_05780 | Ubiquitin-like protein Pup; Protein modifier that is covalently attached to lysine residues of substrate proteins, thereby targeting them for proteasomal degradation. The tagging system is termed pupylation. Belongs to the prokaryotic ubiquitin-like protein family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.450 |
| OLO90776.1 | OLO90775.1 | BKH10_05790 | BKH10_05785 | Ubiquitin-like protein Pup; Protein modifier that is covalently attached to lysine residues of substrate proteins, thereby targeting them for proteasomal degradation. The tagging system is termed pupylation. Belongs to the prokaryotic ubiquitin-like protein family. | Proteasome protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.833 |
| OLO90776.1 | OLO90777.1 | BKH10_05790 | BKH10_05800 | Ubiquitin-like protein Pup; Protein modifier that is covalently attached to lysine residues of substrate proteins, thereby targeting them for proteasomal degradation. The tagging system is termed pupylation. Belongs to the prokaryotic ubiquitin-like protein family. | Proteasome ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.915 |
| OLO90776.1 | OLO90822.1 | BKH10_05790 | BKH10_05795 | Ubiquitin-like protein Pup; Protein modifier that is covalently attached to lysine residues of substrate proteins, thereby targeting them for proteasomal degradation. The tagging system is termed pupylation. Belongs to the prokaryotic ubiquitin-like protein family. | Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.833 |
| OLO90776.1 | OLO90906.1 | BKH10_05790 | BKH10_03995 | Ubiquitin-like protein Pup; Protein modifier that is covalently attached to lysine residues of substrate proteins, thereby targeting them for proteasomal degradation. The tagging system is termed pupylation. Belongs to the prokaryotic ubiquitin-like protein family. | Proteasome ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.784 |
| OLO90776.1 | OLO90908.1 | BKH10_05790 | BKH10_04005 | Ubiquitin-like protein Pup; Protein modifier that is covalently attached to lysine residues of substrate proteins, thereby targeting them for proteasomal degradation. The tagging system is termed pupylation. Belongs to the prokaryotic ubiquitin-like protein family. | Ubiquitin-like protein Pup; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.495 |
| OLO90777.1 | OLO90775.1 | BKH10_05800 | BKH10_05785 | Proteasome ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Proteasome protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.945 |
page 1 of 3