STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OLO89074.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (484 aa)    
Predicted Functional Partners:
OLO89075.1
DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
   0.908
OLO89073.1
Serine hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.812
OLO89544.1
Two-component sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.755
OLO91426.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.750
OLO91315.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.748
OLO89065.1
DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
   0.684
OLO89186.1
DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
   0.646
OLO88174.1
DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.639
OLO89127.1
DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
   0.622
OLO89173.1
Sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.618
Your Current Organism:
Actinomyces naeslundii
NCBI taxonomy Id: 1655
Other names: A. naeslundii, ATCC 12104, CCUG 18310, CCUG 2238, CCUG 32832, CCUG 35333, CDC W826, CIP 103128, DSM 43013, JCM 8349, NCTC 10301
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