STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
folE2GTP cyclohydrolase FolE2. (274 aa)    
Predicted Functional Partners:
yciC
Putative metal chaperone YciC.
  
  
 0.807
folB
Dihydroneopterin aldolase.
    
 0.719
ribBA
Riboflavin biosynthesis protein RibBA.
     
 0.706
queD
6-carboxy-5,6,7,8-tetrahydropterin synthase.
 
  
 0.693
pyk
Pyruvate kinase.
    
  0.688
nrdA
Ribonucleoside-diphosphate reductase 1 subunit alpha.
    
  0.668
pykA
Pyruvate kinase II.
 
  
  0.663
ntrY
Nitrogen regulation protein NtrY.
  
  
  0.659
ODJ86416.1
6-pyruvoyl tetrahydropterin synthase.
    
 0.658
rpfC_2
Sensory/regulatory protein RpfC.
    
  0.656
Your Current Organism:
Thiodiazotropha endolucinida
NCBI taxonomy Id: 1655433
Other names: C. Thiodiazotropha endolucinida, Candidatus Thiodiazotropha endolucinida, Codakia orbicularis gill endosymbiont, endosymbiont of Codakia orbicularis, uncultured Codakia orbicularis gill symbiont
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