STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ODJ87527.1Hypothetical protein. (85 aa)    
Predicted Functional Partners:
ODJ87528.1
Hypothetical protein.
 
  
 0.979
ODJ87529.1
Hypothetical protein.
 
  
 0.972
ODJ87523.1
Hypothetical protein.
 
  
 0.927
ODJ87530.1
DoxX.
 
  
 0.919
ODJ87524.1
Hypothetical protein.
 
  
 0.881
ODJ87825.1
ABC transporter ATP-binding/permease protein.
   
    0.566
ODJ87086.1
FHA domain protein.
   
    0.566
ODJ87787.1
F pilus assembly type-IV secretion system for plasmid transfer.
   
    0.553
ctpF
Putative cation-transporting ATPase F.
   
    0.544
ODJ89019.1
Hypothetical protein.
   
    0.539
Your Current Organism:
Thiodiazotropha endolucinida
NCBI taxonomy Id: 1655433
Other names: C. Thiodiazotropha endolucinida, Candidatus Thiodiazotropha endolucinida, Codakia orbicularis gill endosymbiont, endosymbiont of Codakia orbicularis, uncultured Codakia orbicularis gill symbiont
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.