STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
psrADimethyl sulfoxide reductase subunit A. (841 aa)    
Predicted Functional Partners:
ttrB_2
Tetrathionate reductase subunit B.
 0.993
ODJ86101.1
Pyuvate ferredoxin oxidoreductase subunit delta.
  
 0.986
ttrB_3
Tetrathionate reductase subunit B precursor.
 0.973
fdoH
Formate dehydrogenase-O iron-sulfur subunit.
 
 0.971
ODJ87318.1
Chaperone protein TorD.
 
 0.971
dmsB
Anaerobic dimethyl sulfoxide reductase chain B.
 0.971
ttrB_1
Tetrathionate reductase subunit B precursor.
 0.969
ydhY
Putative ferredoxin-like protein YdhY.
 
 0.959
fdhB1
Formate dehydrogenase iron-sulfur subunit.
 
 0.955
napB
Periplasmic nitrate reductase, electron transfer subunit precursor.
 
 0.918
Your Current Organism:
Thiodiazotropha endolucinida
NCBI taxonomy Id: 1655433
Other names: C. Thiodiazotropha endolucinida, Candidatus Thiodiazotropha endolucinida, Codakia orbicularis gill endosymbiont, endosymbiont of Codakia orbicularis, uncultured Codakia orbicularis gill symbiont
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