STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ODJ86445.1Hypothetical protein. (204 aa)    
Predicted Functional Partners:
ODJ86448.1
6-phosphogluconolactonase.
 
     0.905
ybhR_2
Inner membrane transport permease YbhR.
 
     0.903
ODJ86447.1
ABC transporter ATP-binding protein.
 
     0.873
ODJ86449.1
Hypothetical protein.
 
     0.870
cycB
Cytochrome c-553I precursor.
 
     0.799
ODJ86443.1
Quinoprotein dehydrogenase-associated ABC transporter substrate-binding protein.
 
     0.799
ODJ86452.1
Hypothetical protein.
 
     0.785
ODJ89689.1
Rhodanese-like domain protein.
  
     0.773
ODJ86444.1
Rhodanese-like domain protein.
 
     0.773
ODJ86411.1
Hypothetical protein.
 
     0.771
Your Current Organism:
Thiodiazotropha endolucinida
NCBI taxonomy Id: 1655433
Other names: C. Thiodiazotropha endolucinida, Candidatus Thiodiazotropha endolucinida, Codakia orbicularis gill endosymbiont, endosymbiont of Codakia orbicularis, uncultured Codakia orbicularis gill symbiont
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