STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRO52391.1cysteine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. (375 aa)    
Predicted Functional Partners:
KRO53085.1
Hypothetical protein; Catalyzes the transfer of acetyl from acetyl-CoA to desacetylmycothiol (Cys-GlcN-Ins) to form mycothiol.
  
  
 0.929
KRO53949.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.923
cysM
Cysteine synthase; Catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.921
KRO53399.1
GlcNAc-PI de-N-acetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.909
cysS
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 
0.868
thrS
threonine--tRNA ligase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr).
 
  
 0.861
KRO52389.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.665
pheT
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
  
  
 0.649
KRO53921.1
Cytochrome C biogenesis protein CcmA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.582
KRO52388.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.550
Your Current Organism:
Acidimicrobiia bacterium BACL6
NCBI taxonomy Id: 1655586
Other names: A. bacterium BACL6 MAG-120910-bin40, Acidimicrobiia bacterium BACL6 MAG-120910-bin40
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