Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KRO52185.1 | KRO53882.1 | ABR78_04980 | ABR78_05480 | Thymidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Pup deamidase/depupylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.544 |
| KRO52185.1 | pafA | ABR78_04980 | ABR78_05460 | Thymidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Pup--protein ligase; Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side- chain amino group of a substrate lysine. | 0.544 |
| KRO52212.1 | KRO53877.1 | ABR78_01555 | ABR78_05455 | Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S26 family. | 0.496 |
| KRO52212.1 | KRO53882.1 | ABR78_01555 | ABR78_05480 | Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | Pup deamidase/depupylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.416 |
| KRO53785.1 | KRO53882.1 | ABR78_06585 | ABR78_05480 | Crp/Fnr family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Pup deamidase/depupylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.489 |
| KRO53785.1 | pafA | ABR78_06585 | ABR78_05460 | Crp/Fnr family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Pup--protein ligase; Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side- chain amino group of a substrate lysine. | 0.477 |
| KRO53877.1 | KRO52212.1 | ABR78_05455 | ABR78_01555 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S26 family. | Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | 0.496 |
| KRO53877.1 | KRO53879.1 | ABR78_05455 | ABR78_05465 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S26 family. | Proteasome subunit alpha; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. | 0.603 |
| KRO53877.1 | KRO53880.1 | ABR78_05455 | ABR78_05470 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S26 family. | Proteasome subunit beta; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. | 0.603 |
| KRO53877.1 | KRO53882.1 | ABR78_05455 | ABR78_05480 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S26 family. | Pup deamidase/depupylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.524 |
| KRO53877.1 | pafA | ABR78_05455 | ABR78_05460 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S26 family. | Pup--protein ligase; Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side- chain amino group of a substrate lysine. | 0.639 |
| KRO53877.1 | pup | ABR78_05455 | ABR78_05475 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S26 family. | Hypothetical protein; Protein modifier that is covalently attached to lysine residues of substrate proteins, thereby targeting them for proteasomal degradation. The tagging system is termed pupylation. | 0.523 |
| KRO53879.1 | KRO53877.1 | ABR78_05465 | ABR78_05455 | Proteasome subunit alpha; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S26 family. | 0.603 |
| KRO53879.1 | KRO53880.1 | ABR78_05465 | ABR78_05470 | Proteasome subunit alpha; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. | Proteasome subunit beta; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. | 0.999 |
| KRO53879.1 | KRO53882.1 | ABR78_05465 | ABR78_05480 | Proteasome subunit alpha; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. | Pup deamidase/depupylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.942 |
| KRO53879.1 | pafA | ABR78_05465 | ABR78_05460 | Proteasome subunit alpha; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. | Pup--protein ligase; Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side- chain amino group of a substrate lysine. | 0.987 |
| KRO53879.1 | pup | ABR78_05465 | ABR78_05475 | Proteasome subunit alpha; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. | Hypothetical protein; Protein modifier that is covalently attached to lysine residues of substrate proteins, thereby targeting them for proteasomal degradation. The tagging system is termed pupylation. | 0.935 |
| KRO53880.1 | KRO53877.1 | ABR78_05470 | ABR78_05455 | Proteasome subunit beta; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S26 family. | 0.603 |
| KRO53880.1 | KRO53879.1 | ABR78_05470 | ABR78_05465 | Proteasome subunit beta; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. | Proteasome subunit alpha; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. | 0.999 |
| KRO53880.1 | KRO53882.1 | ABR78_05470 | ABR78_05480 | Proteasome subunit beta; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. | Pup deamidase/depupylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.936 |
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