STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRO53033.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (333 aa)    
Predicted Functional Partners:
ABR78_08320
Uncharacterized protein; Metagenomic; derived from metagenome: marine metagenome.
 
 
  0.967
KRO53035.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.949
KRO53036.1
Xanthine dehydrogenase subunit D; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.926
KRO53034.1
F420-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.809
KRO53040.1
(2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.786
KRO52774.1
Pyridoxal-5'-phosphate-dependent protein subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.742
KRO52772.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.740
KRO52656.1
8-oxoguanine deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.700
KRO53671.1
Uracil phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPRTase family.
  
 
 0.655
KRO53810.1
Purine nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.
    
 0.638
Your Current Organism:
Acidimicrobiia bacterium BACL6
NCBI taxonomy Id: 1655586
Other names: A. bacterium BACL6 MAG-120910-bin40, Acidimicrobiia bacterium BACL6 MAG-120910-bin40
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.