STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001510135_01930Unannotated protein. (159 aa)    
Predicted Functional Partners:
GCA_001510135_00600
Unannotated protein.
   
 0.859
GCA_001510135_00316
Unannotated protein.
    
 0.780
GCA_001510135_00994
Unannotated protein.
    
  0.757
GCA_001510135_02380
Unannotated protein.
    
  0.757
GCA_001510135_01911
Unannotated protein.
  
 0.736
GCA_001510135_02301
Unannotated protein.
    
 0.717
GCA_001510135_02352
Unannotated protein.
    
 0.717
GCA_001510135_02073
Unannotated protein.
   
  0.632
GCA_001510135_02636
Unannotated protein.
    
  0.598
GCA_001510135_01033
Unannotated protein.
 
 
 0.597
Your Current Organism:
Alphaproteobacteria bacterium caspalpha6
NCBI taxonomy Id: 1656909
Other names: A. bacterium casp-alpha6, Alphaproteobacteria bacterium casp-alpha6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.