node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OCA93213.1 | OCA93214.1 | ACU20_02295 | ACU20_02300 | Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.864 |
OCA93213.1 | OCA93836.1 | ACU20_02295 | ACU20_08130 | Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DEAD box helicase family. | 0.847 |
OCA93213.1 | OCA95209.1 | ACU20_02295 | ACU20_05065 | Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.917 |
OCA93213.1 | rplC | ACU20_02295 | ACU20_01070 | Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.813 |
OCA93213.1 | rplO | ACU20_02295 | ACU20_00980 | Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.824 |
OCA93213.1 | rplV | ACU20_02295 | ACU20_01045 | Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. | 0.852 |
OCA93213.1 | rpsB | ACU20_02295 | ACU20_00295 | Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S2; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS2 family. | 0.816 |
OCA93213.1 | rpsE | ACU20_02295 | ACU20_00990 | Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.827 |
OCA93213.1 | rpsL | ACU20_02295 | ACU20_01095 | Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. | 0.844 |
OCA93213.1 | rpsQ | ACU20_02295 | ACU20_01025 | Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.821 |
OCA93214.1 | OCA93213.1 | ACU20_02300 | ACU20_02295 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.864 |
OCA93836.1 | OCA93213.1 | ACU20_08130 | ACU20_02295 | DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DEAD box helicase family. | Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.847 |
OCA93836.1 | OCA95209.1 | ACU20_08130 | ACU20_05065 | DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DEAD box helicase family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.634 |
OCA93836.1 | rplC | ACU20_08130 | ACU20_01070 | DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DEAD box helicase family. | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.902 |
OCA93836.1 | rplO | ACU20_08130 | ACU20_00980 | DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DEAD box helicase family. | 50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.850 |
OCA93836.1 | rplV | ACU20_08130 | ACU20_01045 | DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DEAD box helicase family. | 50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. | 0.814 |
OCA93836.1 | rpsB | ACU20_08130 | ACU20_00295 | DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DEAD box helicase family. | 30S ribosomal protein S2; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS2 family. | 0.543 |
OCA93836.1 | rpsE | ACU20_08130 | ACU20_00990 | DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DEAD box helicase family. | 30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.780 |
OCA93836.1 | rpsL | ACU20_08130 | ACU20_01095 | DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DEAD box helicase family. | 30S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. | 0.525 |
OCA93836.1 | rpsQ | ACU20_08130 | ACU20_01025 | DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DEAD box helicase family. | 30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.672 |