STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OCA95034.1Type I-E CRISPR-associated endoribonuclease Cas2; Derived by automated computational analysis using gene prediction method: Protein Homology. (104 aa)    
Predicted Functional Partners:
cas1
Type I-E CRISPR-associated endonuclease Cas1; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.
 
 
 0.999
OCA95036.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.966
OCA95039.1
Type I-E CRISPR-associated protein Cas7/Cse4/CasC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.908
OCA95040.1
Type I-E CRISPR-associated protein Cas5/CasD; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.897
OCA95037.1
Type I-E CRISPR-associated protein Cas6/Cse3/CasE; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.842
OCA96021.1
Integration host factor; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial histone-like protein family.
    
   0.672
OCA95187.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.551
OCA95038.1
Type I-E CRISPR-associated protein Cse2/CasB; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.454
Your Current Organism:
Actinobaculum suis
NCBI taxonomy Id: 1657
Other names: A. suis, ATCC 33144, Actinomyces suis, CCUG 19206, CIP 105361, Corynebacterium suis, DSM 20639, Eubacterium suis, LMG 18291, LMG:18291, strain Soltys 50052
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