STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OCA93619.1Rhamnulose-1-phosphate aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (260 aa)    
Predicted Functional Partners:
OCA93611.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.986
OCA93609.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.843
OCA95204.1
Class II fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family.
  
 
 0.794
OCA93618.1
L-rhamnose mutarotase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.773
OCA94556.1
Triose-phosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.718
tpiA
Triose-phosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
  
 
 0.718
araA
L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
  
 
 0.559
OCA93617.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.486
OCA93799.1
Na-galactoside symporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.462
OCA93610.1
L-rhamnose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.432
Your Current Organism:
Actinobaculum suis
NCBI taxonomy Id: 1657
Other names: A. suis, ATCC 33144, Actinomyces suis, CCUG 19206, CIP 105361, Corynebacterium suis, DSM 20639, Eubacterium suis, LMG 18291, LMG:18291, strain Soltys 50052
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