STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001282685_00667Unannotated protein. (524 aa)    
Predicted Functional Partners:
GCA_001282685_00672
Unannotated protein.
 
 
 0.966
GCA_001282685_04022
Unannotated protein.
 
 
 0.964
GCA_001282685_04004
Unannotated protein.
  
 
 0.951
GCA_001282685_03271
Unannotated protein.
 
0.918
GCA_001282685_00322
Unannotated protein.
  
 
 0.912
GCA_001282685_02021
Unannotated protein.
 
 0.869
GCA_001282685_00341
Unannotated protein.
    
 0.863
GCA_001282685_02364
Unannotated protein.
    
 0.863
GCA_001282685_02557
Unannotated protein.
    
 0.863
GCA_001282685_02827
Unannotated protein.
    
 0.863
Your Current Organism:
Niameybacter massiliensis
NCBI taxonomy Id: 1658108
Other names: DSM 100592, Lachnospiraceae bacterium Mt14, N. massiliensis, strain Mt14
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.