STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001282685_01066Unannotated protein. (859 aa)    
Predicted Functional Partners:
GCA_001282685_00997
Unannotated protein.
 
 
 0.997
GCA_001282685_02507
Unannotated protein.
   
 0.993
GCA_001282685_00964
Unannotated protein.
    
 0.992
GCA_001282685_00533
Unannotated protein.
 
 
 0.959
GCA_001282685_01779
Unannotated protein.
  
  
 0.949
GCA_001282685_03076
Unannotated protein.
 
 0.946
GCA_001282685_01777
Unannotated protein.
    
 0.939
GCA_001282685_04256
Unannotated protein.
     
 0.919
GCA_001282685_03283
Unannotated protein.
 
  
 0.914
GCA_001282685_03938
Unannotated protein.
    
 
 0.893
Your Current Organism:
Niameybacter massiliensis
NCBI taxonomy Id: 1658108
Other names: DSM 100592, Lachnospiraceae bacterium Mt14, N. massiliensis, strain Mt14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.