STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001282685_01199Unannotated protein. (325 aa)    
Predicted Functional Partners:
GCA_001282685_01200
Unannotated protein.
       0.752
GCA_001282685_00073
Unannotated protein.
    
  0.690
GCA_001282685_02661
Unannotated protein.
    
  0.688
GCA_001282685_01198
Unannotated protein.
       0.558
GCA_001282685_03115
Unannotated protein.
    
 0.537
GCA_001282685_03116
Unannotated protein.
     
 0.532
GCA_001282685_00427
Unannotated protein.
     
 0.530
GCA_001282685_00426
Unannotated protein.
    
 0.528
GCA_001282685_04239
Unannotated protein.
  
    0.487
GCA_001282685_00945
Unannotated protein.
   
    0.479
Your Current Organism:
Niameybacter massiliensis
NCBI taxonomy Id: 1658108
Other names: DSM 100592, Lachnospiraceae bacterium Mt14, N. massiliensis, strain Mt14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.