STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001282685_04216Unannotated protein. (696 aa)    
Predicted Functional Partners:
GCA_001282685_01976
Unannotated protein.
     
 0.882
GCA_001282685_01109
Unannotated protein.
     
 0.878
GCA_001282685_01977
Unannotated protein.
  
 
  0.871
GCA_001282685_01112
Unannotated protein.
    
 0.867
GCA_001282685_04207
Unannotated protein.
  
 
 0.867
GCA_001282685_03313
Unannotated protein.
     
  0.828
GCA_001282685_04209
Unannotated protein.
    
 0.825
GCA_001282685_04176
Unannotated protein.
  
 
  0.787
GCA_001282685_04190
Unannotated protein.
    
  0.786
GCA_001282685_03442
Unannotated protein.
    
 0.751
Your Current Organism:
Niameybacter massiliensis
NCBI taxonomy Id: 1658108
Other names: DSM 100592, Lachnospiraceae bacterium Mt14, N. massiliensis, strain Mt14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.