STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001244545_01897Unannotated protein. (808 aa)    
Predicted Functional Partners:
GCA_001244545_01898
Unannotated protein.
     0.965
GCA_001244545_01900
Unannotated protein.
 
   
 0.946
GCA_001244545_01896
Unannotated protein.
  
 0.923
GCA_001244545_01899
Unannotated protein.
 
     0.900
GCA_001244545_01894
Unannotated protein.
 
     0.894
GCA_001244545_01895
Unannotated protein.
 
     0.882
GCA_001244545_01893
Unannotated protein.
 
  
 0.862
GCA_001244545_01901
Unannotated protein.
 
  
 0.831
GCA_001244545_01889
Unannotated protein.
 
   
 0.798
GCA_001244545_01902
Unannotated protein.
 
     0.788
Your Current Organism:
Stoquefichus sp. SB1
NCBI taxonomy Id: 1658109
Other names: C. Stoquefichus sp. SB1, Candidatus Stoquefichus sp. SB1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.