STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACJ72_08730NmrA domain-containing protein. (148 aa)    
Predicted Functional Partners:
ACJ72_01850
Uncharacterized protein.
 
      0.788
ACJ72_01921
Pre-mRNA-splicing factor cef1.
    
   0.477
ACJ72_04582
RRM domain-containing protein.
    
 0.468
ACJ72_01477
Uncharacterized protein.
    
 0.468
ACJ72_00448
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
    
 
 0.461
Your Current Organism:
Emmonsia sp. CAC2015a
NCBI taxonomy Id: 1658172
Other names: E. sp. CAC-2015a, Emmonsia sp. CAC-2015a
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.