STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU68272.1Cytochrome oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (45 aa)    
Predicted Functional Partners:
AKU68270.1
Cytochrome C oxidase Cbb3; CcoN; FixN; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heme-copper respiratory oxidase family.
  
 
 0.998
AKU68271.1
Cytochrome C oxidase Cbb3; CcoO; FixO; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.998
AKU67761.1
Cytochrome oxidase subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
  
 0.997
AKU67368.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.765
AKU66920.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.688
AKU67762.1
Cytochrome C oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.654
AKU67760.1
Cytochrome oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.635
AKU66392.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.620
AKU66974.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.601
AKU66655.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.593
Your Current Organism:
Ottowia
NCBI taxonomy Id: 1658672
Other names: O. sp. oral taxon 894, Ottowia sp. oral taxon 894
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