STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANI62246.1Sugar ABC transporter ATPase. (182 aa)    
Predicted Functional Partners:
ANI62247.1
Permease; Pfam: Sulfite exporter TauE/SafE.
       0.609
guaB
Inosine 5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
       0.561
ANI62248.1
Pfam: LysR substrate binding domain; Pfam: Bacterial regulatory helix-turn-helix protein, lysR family; PRINTS: LysR bacterial regulatory protein HTH signature; Belongs to the LysR transcriptional regulatory family.
       0.411
xseA
Exodeoxyribonuclease; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.
       0.402
ANI62250.1
Pfam: Peptidase family M23.
       0.402
Your Current Organism:
Pseudomonas sp. GR 602
NCBI taxonomy Id: 1659194
Other names: P. sp. GR 6-02, Pseudomonas sp. GR 6-02
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.