STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpmFRibosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family. (111 aa)    
Predicted Functional Partners:
ctc
Ribosomal protein L25, Ctc-form; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.
  
 
 0.999
rpmE
Ribosomal protein L31.
  
 
 0.999
rpsB
Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.
  
 
 0.999
rpsP
Ribosomal protein S16.
  
 
 0.999
rpmG
Ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family.
  
 
 0.999
rpsM
Ribosomal protein S13; Belongs to the universal ribosomal protein uS13 family.
  
 
 0.999
rpsK
Ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.
  
 
 0.999
rpsD
Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.
  
 
 0.999
rplQ
Ribosomal protein L17.
  
 
 0.999
rplM
Large subunit ribosomal protein L13.
  
 
 0.999
Your Current Organism:
Parcubacteria bacterium C7867001
NCBI taxonomy Id: 1659195
Other names: P. bacterium C7867-001, Parcubacteria bacterium C7867-001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.