STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KND49084.1Hypothetical protein. (475 aa)    
Predicted Functional Partners:
ftsX
Cell division transport system permease protein; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
   
 
 0.904
pheS
phenylalanine--tRNA ligase, alpha subunit; Belongs to the class-II aminoacyl-tRNA synthetase family.
    
  0.859
KND49037.1
Sensory box/GGDEF family protein.
    
 0.822
phoR
Two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR.
    
 0.816
rpmE
Ribosomal protein L31.
  
    0.772
KND48983.1
Hypothetical protein.
 
     0.752
ctc
Ribosomal protein L25, Ctc-form; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.
     
 0.741
KND48412.1
O-antigen ligase.
 
 
 0.727
KND48451.1
Hypothetical protein.
 
     0.726
KND48460.1
Penicillin-resistant dd-carboxypeptidase-like protein.
 
   
 0.645
Your Current Organism:
Parcubacteria bacterium C7867005
NCBI taxonomy Id: 1659199
Other names: P. bacterium C7867-005, Parcubacteria bacterium C7867-005
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.