STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KSW13172.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (90 aa)    
Predicted Functional Partners:
KSW13171.1
Pilus assembly protein TadE; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
KSW13170.1
Pilus assembly protein TadE; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.757
KSW13686.1
Type II secretion system protein F; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.750
ptlH
Pilus assembly protein CpaF; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.668
KSW12803.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.613
KSW10955.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.558
KSW13175.1
Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.543
KSW13200.1
Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.504
KSW12802.1
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.501
KSW13174.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.491
Your Current Organism:
Schaalia odontolytica
NCBI taxonomy Id: 1660
Other names: ATCC 17929, BCCM/LMG:18080, CCUG 20536, CIP 101124, DSM 19120, DSM 43760, JCM 14871, LMG 18080, LMG:18080, NCTC 9935, S. odontolytica
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.