Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KSW10885.1 | KSW13181.1 | APY09_05260 | APY09_02150 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.404 |
KSW13181.1 | KSW10885.1 | APY09_02150 | APY09_05260 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.404 |
KSW13181.1 | KSW13184.1 | APY09_02150 | APY09_02165 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Serine/threonine protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.714 |
KSW13181.1 | lgt | APY09_02150 | APY09_08080 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | 0.553 |
KSW13181.1 | ponA | APY09_02150 | APY09_02160 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.649 |
KSW13181.1 | whiB-2 | APY09_02150 | APY09_02155 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.835 |
KSW13184.1 | KSW13181.1 | APY09_02165 | APY09_02150 | Serine/threonine protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.714 |
KSW13184.1 | ponA | APY09_02165 | APY09_02160 | Serine/threonine protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.814 |
KSW13184.1 | whiB-2 | APY09_02165 | APY09_02155 | Serine/threonine protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.716 |
lgt | KSW13181.1 | APY09_08080 | APY09_02150 | Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.553 |
ponA | KSW13181.1 | APY09_02160 | APY09_02150 | Transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.649 |
ponA | KSW13184.1 | APY09_02160 | APY09_02165 | Transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Serine/threonine protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.814 |
ponA | whiB-2 | APY09_02160 | APY09_02155 | Transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.649 |
whiB-2 | KSW13181.1 | APY09_02155 | APY09_02150 | Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.835 |
whiB-2 | KSW13184.1 | APY09_02155 | APY09_02165 | Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | Serine/threonine protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.716 |
whiB-2 | ponA | APY09_02155 | APY09_02160 | Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | Transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.649 |