Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KSW13085.1 | KSW13417.1 | APY09_01605 | APY09_03475 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.418 |
| KSW13085.1 | fbpC_2 | APY09_01605 | APY09_03480 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.428 |
| KSW13416.1 | KSW13417.1 | APY09_03470 | APY09_03475 | Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.932 |
| KSW13416.1 | fbpC_2 | APY09_03470 | APY09_03480 | Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.855 |
| KSW13416.1 | nreC_2 | APY09_03470 | APY09_03465 | Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.998 |
| KSW13417.1 | KSW13085.1 | APY09_03475 | APY09_01605 | ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.418 |
| KSW13417.1 | KSW13416.1 | APY09_03475 | APY09_03470 | ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.932 |
| KSW13417.1 | drrA_2 | APY09_03475 | APY09_06760 | ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.429 |
| KSW13417.1 | fbpC_2 | APY09_03475 | APY09_03480 | ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.919 |
| KSW13417.1 | nreC_2 | APY09_03475 | APY09_03465 | ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.780 |
| atpA | atpD | APY09_06640 | APY09_06650 | ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | 0.999 |
| atpA | drrA_2 | APY09_06640 | APY09_06760 | ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.422 |
| atpA | fbpC_2 | APY09_06640 | APY09_03480 | ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.422 |
| atpD | atpA | APY09_06650 | APY09_06640 | ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | 0.999 |
| atpD | drrA_2 | APY09_06650 | APY09_06760 | ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.440 |
| atpD | fbpC_2 | APY09_06650 | APY09_03480 | ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.440 |
| drrA_2 | KSW13417.1 | APY09_06760 | APY09_03475 | ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.429 |
| drrA_2 | atpA | APY09_06760 | APY09_06640 | ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | 0.422 |
| drrA_2 | atpD | APY09_06760 | APY09_06650 | ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | 0.440 |
| drrA_2 | fbpC_2 | APY09_06760 | APY09_03480 | ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.916 |
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