STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CIGN_0273Hypothetical protein. (80 aa)    
Predicted Functional Partners:
pgp2
Peptidoglycan LD-carboxypeptidase; Pfam match to PF03734.10 YkuD.
       0.789
alr
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
       0.789
CIGN_0271
Copper-binding protein (DUF461 domain); Pfam match to PF04314.9 DUF461.
       0.564
pseB
UDP-N-acetylglucosamine 4,6-dehydratase; Pfam match to PF02719.11 Polysacc_synt_2.
       0.521
Your Current Organism:
Campylobacter sp. NCTC 13003
NCBI taxonomy Id: 1660064
Other names: C. sp. NCTC 13003
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.