STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARR01806.1Hypothetical protein. (177 aa)    
Predicted Functional Partners:
ARR01657.1
Hypothetical protein.
  
 0.978
ctsE
Transformation system, type II secretion system ATPase CtsE; Pfam matches to PF00437.16 T2SSE, and to PF05157.11 T2SSE_N.
   
 
 0.840
ARR01805.1
Hypothetical protein.
       0.786
ARR01807.1
Hypothetical protein.
       0.786
ctsF
Transformation system, type II secretion system membrane protein CtsF; Pfam matches to PF00482.19 T2SSF, and to PF00482.19 T2SSF.
   
 
 0.675
ARR01802.1
Hypothetical protein.
       0.647
miaB
Isopentenyl-adenosine A37 tRNA methylthiolase; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.
       0.647
ARR01804.1
Lysophospholipid acyltransferase family protein (DUF374 domain); Pfam match to PF04028.9 DUF374.
       0.647
nusA
Transcription termination factor; Participates in both transcription termination and antitermination.
       0.452
Your Current Organism:
Campylobacter sp. RM8964
NCBI taxonomy Id: 1660074
Other names: C. sp. RM8964
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.