STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ODS99315.1Metal-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (158 aa)    
Predicted Functional Partners:
ABS56_01635
Multidrug transporter AcrB; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.576
ODS99316.1
TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.507
ODS99318.1
Response regulator SirA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sulfur carrier protein TusA family.
   
   0.478
ODS99310.1
Copper-translocating P-type ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.469
ODS99590.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.435
ODS99614.1
Copper-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.418
ODS99141.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.413
ODS99317.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.410
ODS99601.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.405
Your Current Organism:
Lautropia sp. SCN6989
NCBI taxonomy Id: 1660104
Other names: L. sp. SCN 69-89, Lautropia sp. SCN 69-89
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.