STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ODT85017.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (169 aa)    
Predicted Functional Partners:
ODT89359.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.691
ODT84697.1
FAD-binding oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.689
ODT85018.1
Type II restriction endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.554
ODT86370.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.497
ODT84346.1
Cation transporter; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.497
ODT85016.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.468
ODT89118.1
Cation transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.407
ODT89423.1
Cation transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.405
Your Current Organism:
Phenylobacterium sp. SCN7031
NCBI taxonomy Id: 1660129
Other names: P. sp. SCN 70-31, Phenylobacterium sp. SCN 70-31
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.