STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ODV09152.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (163 aa)    
Predicted Functional Partners:
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
    
 0.855
ODV07437.1
Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.
     
 0.837
ODV01225.1
Protoporphyrin IX magnesium chelatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.833
ODV04492.1
Coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.
    
 0.818
ODV05690.1
Peroxidase; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family.
     
 0.616
ODV05732.1
Peroxidase; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family.
     
 0.616
ODU99597.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.616
ODV03871.1
Peroxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.552
ODV06796.1
Magnesium-transporting ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.533
ODV04468.1
Magnesium-transporting ATPase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
  0.533
Your Current Organism:
Pseudonocardia sp. SCN7327
NCBI taxonomy Id: 1660132
Other names: P. sp. SCN 73-27, Pseudonocardia sp. SCN 73-27
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