STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ODV04734.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (659 aa)    
Predicted Functional Partners:
ODV06904.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.966
ODV04916.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.866
ODV08988.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.842
ODV00097.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.842
ODV00534.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.701
ODV04733.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.623
ODV09009.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.619
ODV08325.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.619
ODV05677.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.619
ODV04528.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.619
Your Current Organism:
Pseudonocardia sp. SCN7327
NCBI taxonomy Id: 1660132
Other names: P. sp. SCN 73-27, Pseudonocardia sp. SCN 73-27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.