STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ODS83572.1Methyltransferase type 12; Derived by automated computational analysis using gene prediction method: Protein Homology. (250 aa)    
Predicted Functional Partners:
ODS81926.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.919
ODS77410.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.659
ODS85090.1
Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.654
ODS79440.1
Methyltransferase type 12; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.654
metK
Methionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.
    
  0.606
ODS78239.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
  0.470
ODS83571.1
Carbohydrate-binding protein SusD; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.464
ODS83589.1
SusC/RagA family TonB-linked outer membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.464
ODS83906.1
AMP nucleosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.460
ODS83570.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.427
Your Current Organism:
Cytophagaceae bacterium SCN5212
NCBI taxonomy Id: 1660162
Other names: C. bacterium SCN 52-12, Cytophagaceae bacterium SCN 52-12
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