STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ODS82282.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (179 aa)    
Predicted Functional Partners:
fusA
Translation elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 s [...]
    
  0.927
ODS82281.1
Gamma-glutamyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.776
ODS84676.1
Chorismate mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.701
ODS80425.1
3-deoxy-7-phosphoheptulonate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.700
ODS82283.1
Bile acid:sodium symporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.682
ODS82287.1
Gluconolactonase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.616
ODS86561.1
Methyltransferase type 11; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.597
ODS78607.1
Serine dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.585
ODS84480.1
Acetolactate synthase small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.560
ODS82280.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.559
Your Current Organism:
Cytophagaceae bacterium SCN5212
NCBI taxonomy Id: 1660162
Other names: C. bacterium SCN 52-12, Cytophagaceae bacterium SCN 52-12
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