STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ODS78481.1Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (230 aa)    
Predicted Functional Partners:
ODS83815.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.999
ODS72055.1
Response regulator receiver protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
ODS82585.1
PAS domain-containing sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.984
ODS78480.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  0.970
ODS84001.1
Two-component sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  0.931
ABS46_07435
Glycan metabolism protein; Metagenomic; derived from metagenome: bioreactor metagenome.
 
  0.925
ODS84138.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.904
ODS84820.1
Two-component sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.886
ODS82206.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  0.883
ODS84004.1
Two-component sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.878
Your Current Organism:
Cytophagaceae bacterium SCN5212
NCBI taxonomy Id: 1660162
Other names: C. bacterium SCN 52-12, Cytophagaceae bacterium SCN 52-12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.