STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ODT05297.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (894 aa)    
Predicted Functional Partners:
ODT02097.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.875
ODT02113.1
Phosphonate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.872
ODT02096.1
RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.853
ODT05298.1
PadR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.807
macB
Macrolide ABC transporter ATP-binding protein; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
  
  0.802
ODT02114.1
PAS domain-containing sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.761
ODT05324.1
Macrolide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  0.744
ODT03240.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.692
ODT01708.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
  0.690
ODT03881.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.687
Your Current Organism:
Gemmatimonadetes bacterium SCN7022
NCBI taxonomy Id: 1660163
Other names: G. bacterium SCN 70-22, Gemmatimonadetes bacterium SCN 70-22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.